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Interactive visual analysis of drug-target interaction networks using Drug Target Profiler, with applications to precision medicine and drug repurposing

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10.1093/bib/bby119
Tanoli, Ziaurrehman; Alam, Zaid; Ianevski, Aleksandr; Wennerberg, Krister; Vähä-Koskela, Markus; Ait...
Briefings in bioinformatics2020Publicationer information ikon

Identification of drug candidates and repurposing opportunities through compound-target interaction networks

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DOI
10.1517/17460441.2015.1096926
Cichonska, Anna; Rousu, Juho; Aittokallio, Tero
Expert opinion on drug discovery2015Publicationer information ikon

Drug Target Commons 2.0: a community platform for systematic analysis of drug target interaction profiles

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10.1093/database/bay083
Tanoli, ZiaurRehman; Alam, Zaid; Vähä-Koskela, Markus; Ravikumar, Balaguru; Malyutina, Alina; Jaiswa...
Database-the journal of biological databases and curation2018Publicationer information ikon

Toward more realistic drug-target interaction predictions

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10.1093/bib/bbu010
Pahikkala, Tapio; Airola, Antti; Pietila, Sami; Shakyawar, Sushil; Szwajda, Agnieszka; Tang, Jing; A...
briefings bioinformatics2015Publicationer information ikon

Using BERT to identify drug-target interactions from whole PubMed

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10.1186/s12859-022-04768-x
Aldahdooh, Jehad; Vähä-Koskela, Markus; Tang, Jing; Tanoli, Ziaurrehman
BMC Bioinformatics2022Publicationer information ikon

DrugE-Rank Improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank

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10.1093/bioinformatics/btw244
Yuan, Qingjun; Gao, Junning; Wu, Dongliang; Zhang, Shihua; Mamitsuka, Hiroshi; Zhu, Shanfeng
Bioinformatics2016Publicationer information ikon

Integrated analysis of drug sensitivity and selectivity to predict synergistic drug combinations and target coaddictions in cancer

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10.1007/978-1-4939-8891-4_12
Jaiswal, Alok; Yadav, Bhagwan; Wennerberg, Krister; Aittokallio, Tero
Methods in molecular biology2019Publicationer information ikon

Target-specific compound selectivity for multi-target drug discovery and repurposing

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10.3389/fphar.2022.1003480
Wang, Tianduanyi; Pulkkinen, Otto I.; Aittokallio, Tero
Frontiers in pharmacology2022Publicationer information ikon

A comparison of embedding aggregation strategies in drug-target interaction prediction

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10.1186/s12859-024-05684-y
Iliadis Dimitrios, De Baets Bernard, Pahikkala Tapio, Waegeman Willem
BMC Bioinformatics2024Publicationer information ikon

Deep Learning in Drug Target Interaction Prediction: Current and Future Perspective

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DOI
10.2174/0929867327666200907141016
Abbasi, Karim; Razzaghi, Parvin; Poso, Antti; Ghanbari-Ara, Saber; Masoudi-Nejad, Ali
Current medicinal chemistry2020

Interactive visual analysis of drug-target interaction networks using Drug Target Profiler, with applications to precision medicine and drug repurposing

Referentgranskad
Öppen tillgång
DOI
10.1093/bib/bby119
2020

Identification of drug candidates and repurposing opportunities through compound-target interaction networks

Referentgranskad
DOI
10.1517/17460441.2015.1096926
2015

Drug Target Commons 2.0: a community platform for systematic analysis of drug target interaction profiles

Referentgranskad
Öppen tillgång
DOI
10.1093/database/bay083
2018

Toward more realistic drug-target interaction predictions

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DOI
10.1093/bib/bbu010
2015

Using BERT to identify drug-target interactions from whole PubMed

Referentgranskad
Öppen tillgång
DOI
10.1186/s12859-022-04768-x
2022

DrugE-Rank Improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank

Referentgranskad
Öppen tillgång
DOI
10.1093/bioinformatics/btw244
2016

Integrated analysis of drug sensitivity and selectivity to predict synergistic drug combinations and target coaddictions in cancer

Referentgranskad
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DOI
10.1007/978-1-4939-8891-4_12
2019

Target-specific compound selectivity for multi-target drug discovery and repurposing

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Öppen tillgång
DOI
10.3389/fphar.2022.1003480
2022

A comparison of embedding aggregation strategies in drug-target interaction prediction

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Öppen tillgång
DOI
10.1186/s12859-024-05684-y
2024

Deep Learning in Drug Target Interaction Prediction: Current and Future Perspective

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DOI
10.2174/0929867327666200907141016
2020